Methanococcales

*Methanococcales*
Methanococcales
Научная классификация
	Домен: Археи Тип: Эвриархеоты Класс: Methanococci Boone 2002 Порядок: Methanococcales
Международное научное название
	Methanococcales ; Balch and Wolfe 1981
ITIS	951445
NCBI	2182
EOL	7943

Methanococcales (лат.) — порядок метанообразующих архей, на июнь 2017 года единственный в классе Methanococci Boone 2002[1][2] (синоним Methanothermea Cavalier-Smith 2002[3]).

Классификация

Современная классификация базируется на данных List of Prokaryotic names with Standing in Nomenclature (LPSN)[1], а также Национального центра биотехнологической информации (NCBI)[2]. На июль 2017 года в порядок включают следующие семейства и роды:

Семейство Methanococcaceae Balch and Wolfe 1981[4]
- Род Methanococcus Kluyver and van Niel 1936[5] emend. Barker 1936[6] emend. Mah and Kuhn 1984[7][8][9][10][11].
- Род Methanothermococcus Whitman 2002[12][13]
Семейство Methanocaldococcaceae Whitman et al. 2002[14]
- Род Methanocaldococcus Whitman 2002[14]
- Род Methanotorris Whitman 2002[14]

Филогения

Более детальные взаимоотношения таксонов показаны в исследованиях 16s рРНК, релиз 106 'The All-Species Living Tree' Project[15]:

Methanococcales

Methanocaldococcus

M. fervens

M. jannaschii (типовой вид)

M. vulcanius

M. indicus

M. infernus

Methanotorris

M. formicicus (типовой вид)

Methanothermococcus thermolithotrophicus (типовой вид)

Methanococcus vannielii (типовой вид)

Methanothermococcus okinawensis

Methanococcus aeolicus

Примечания

Classification of domains and phyla - Hierarchical classification of prokaryotes (bacteria) : Version 2.0 : [англ.] // LPSN. — 2016. — 2 October.
Taxonomy Browser : Methanococci : [англ.] // NCBI. (Дата обращения: 22 июля 2017).
Class Methanothermea : [англ.] // LPSN. (Дата обращения: 22 июля 2017).
Balch W. E., Fox G. E., Magrum L. J., Woses C. R., and Wolfe R. S. 1979. Methanogens: reevaluation of a unique biological group. Microbiol. Rev. 43: 260—296.
Kluyver A. J., and van Niel C. B. 1936. Prospects for a natural system of classification of bacteria. Zentralbl. Bakterol. Parasitenkd. Infectinskr. Hyg., Abt. II 94: 369—403.
Barker H. A. 1936. Studies upon the methane-producing bacteria. Arch. Mikrobiol. 7: 420—438.
Mah R. A., and Kuhn D. A. 1984. Transfer of the type species of the genus Methanococcus to the genus Methanosarcina naming it Methanosarcina mazei (Barker 1936) comb. nov. et emend. and conservation of the genus Methanococcus (Approved Lists, 1980) with Methanococcus vannielii (Approved Lists, 1980) as the type species. Request for an opinion. Int. J. Syst. Bacteriol. 34: 263—265.
Wayne L. G. 1986. Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published in 1983 and 1984. Int. J. Syst. Bacteriol. 36: 357—358.
Keswani J., Orkand S., Premachandran U., Mandelco L., Franklin M. J., and Whitman W. B. 1996. Phylogeny and taxonomy of mesophilic Methanococcus spp. and comparison of rRNA, DNA hybridization, and phenotypic methods. Int. J. Syst. Bacteriol. 46: 727—735. PubMed.
International Union of Microbiological Societies. 1986. Opinion 62. Judicial Commision of the International Committee on Systematics of Prokaryotes: Transfer of the type species of the genus Methanococcus to the genus Methanosarcina as Methanosarcina mazei (Barker 1936) comb. nov. et emend. Mah and Kuhn 1984 and conservation of the genus Methanococcus (Approved Lists, 1980) emend. Mah and Kuhn 1984 with Methanococcus vannielii (Approved Lists, 1980) as the type species. Int. J. Syst. Bacteriol. 36: 491.
Jeanthon C., L'Haridon S., Pradel N., and Prieur D. 1999. Rapid identification of hyperthermophilic methanococci isolated from deep-sea hydrothermal vents. Int. J. Syst. Bacteriol. 49: 591—594.
Whitman W. B. 2001. Genus II. Methanothermococcus gen. nov. In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (D. R. Boone and R. W. Castenholz, eds.), Springer-Verlag, New York. pp. 241—242.
Koga Y., Morii H., Akagawa-Matsushita M., and Ohga I. 1998. Correlation of polar lipid composition with 16S rRNA phylogeny in methanogens. Further analysis of lipid component parts. Biosci. Biotechnol. Biochem. 62: 230—236.
Whitman W. B., Boone D. R., and Koga Y. 2001. Family II. Methanocaldococcaceae fam. nov. In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D. R. Boone and R. W. Castenholz, eds.), Springer-Verlag, New York. pp. 242—246.
The All-Species Living Tree (Release LTPs106) : [PDF] : [англ.] // Silva Comprehensive Ribosomal RNA Database. — 2011. — August. — Дата обращения: 17.11.2011. — Архивированная копия (неопр.). Дата обращения: 5 августа 2012. Архивировано 11 августа 2012 года.

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[LPSN_all-1] Classification of domains and phyla - Hierarchical classification of prokaryotes (bacteria) : Version 2.0 : [англ.] // LPSN. — 2016. — 2 October.

[NCBI_tax-2] Taxonomy Browser : Methanococci : [англ.] // NCBI. (Дата обращения: 22 июля 2017).

[LPSN-3] Class Methanothermea : [англ.] // LPSN. (Дата обращения: 22 июля 2017).

[Balch1979-4] Balch W. E., Fox G. E., Magrum L. J., Woses C. R., and Wolfe R. S. 1979. Methanogens: reevaluation of a unique biological group. Microbiol. Rev. 43: 260—296.

[Kluyver1936-5] Kluyver A. J., and van Niel C. B. 1936. Prospects for a natural system of classification of bacteria. Zentralbl. Bakterol. Parasitenkd. Infectinskr. Hyg., Abt. II 94: 369—403.

[Barker1936-6] Barker H. A. 1936. Studies upon the methane-producing bacteria. Arch. Mikrobiol. 7: 420—438.

[Mah1984a-7] Mah R. A., and Kuhn D. A. 1984. Transfer of the type species of the genus Methanococcus to the genus Methanosarcina naming it Methanosarcina mazei (Barker 1936) comb. nov. et emend. and conservation of the genus Methanococcus (Approved Lists, 1980) with Methanococcus vannielii (Approved Lists, 1980) as the type species. Request for an opinion. Int. J. Syst. Bacteriol. 34: 263—265.

[Wayne1986-8] Wayne L. G. 1986. Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published in 1983 and 1984. Int. J. Syst. Bacteriol. 36: 357—358.

[Keswani1996-9] Keswani J., Orkand S., Premachandran U., Mandelco L., Franklin M. J., and Whitman W. B. 1996. Phylogeny and taxonomy of mesophilic Methanococcus spp. and comparison of rRNA, DNA hybridization, and phenotypic methods. Int. J. Syst. Bacteriol. 46: 727—735. PubMed.

[Opinion62-10] International Union of Microbiological Societies. 1986. Opinion 62. Judicial Commision of the International Committee on Systematics of Prokaryotes: Transfer of the type species of the genus Methanococcus to the genus Methanosarcina as Methanosarcina mazei (Barker 1936) comb. nov. et emend. Mah and Kuhn 1984 and conservation of the genus Methanococcus (Approved Lists, 1980) emend. Mah and Kuhn 1984 with Methanococcus vannielii (Approved Lists, 1980) as the type species. Int. J. Syst. Bacteriol. 36: 491.

[Jeanthon1999b-11] Jeanthon C., L'Haridon S., Pradel N., and Prieur D. 1999. Rapid identification of hyperthermophilic methanococci isolated from deep-sea hydrothermal vents. Int. J. Syst. Bacteriol. 49: 591—594.

[Whitman2001a-12] Whitman W. B. 2001. Genus II. Methanothermococcus gen. nov. In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (D. R. Boone and R. W. Castenholz, eds.), Springer-Verlag, New York. pp. 241—242.

[Koga1998-13] Koga Y., Morii H., Akagawa-Matsushita M., and Ohga I. 1998. Correlation of polar lipid composition with 16S rRNA phylogeny in methanogens. Further analysis of lipid component parts. Biosci. Biotechnol. Biochem. 62: 230—236.

[Whitman2001-14] Whitman W. B., Boone D. R., and Koga Y. 2001. Family II. Methanocaldococcaceae fam. nov. In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D. R. Boone and R. W. Castenholz, eds.), Springer-Verlag, New York. pp. 242—246.

[15] The All-Species Living Tree (Release LTPs106) : [PDF] : [англ.] // Silva Comprehensive Ribosomal RNA Database. — 2011. — August. — Дата обращения: 17.11.2011. — Архивированная копия (неопр.). Дата обращения: 5 августа 2012. Архивировано 11 августа 2012 года.

Классификация архей
Euryarchaeota	Archaeoglobi Hadesarchaea Halobacteria Methanobacteria Methanococci Methanomicrobia Methanonatronarchaeia Methanopyri Theionarchaea Thermococci Thermoplasmata
TACK	Aigarchaeota Bathyarchaeota Crenarchaeota Geoarchaeota Korarchaeota Thaumarchaeota Verstraetearchaeota
Asgard	Heimdallarchaeota Lokiarchaeota Odinarchaeota Thorarchaeota
DPANN	Aenigmarchaeota Diapherotrites Micrarchaeota Nanoarchaeota Nanohaloarchaeota Pacearchaeota Parvarchaeota Undinarchaeota Woesearchaeota
См. также: Прокариоты Neomura